Processed single-cell RNA-seq and single-cell DNA-seq (CNV) data for "clonealign: statistical integration of independent single-cell RNA & DNA-seq from human cancers" This tar.gz has the following directory structure: "SA501" and "T_OV2295" directories indicate the experiment (SA501 PDX or OV2295 cell line). Within each are "10X" and "cnv" directories: The 10X directories contain the CellRanger output (barcodes.tsv, genes.tsv, matrix.mtx) for each each sample The cnv directory contains processed copy number calls for all single cells and aggregated to clone level
Single-cell transcriptome sequencing and cell lineage tracing technologies have enabled high- resolu...
Abstract Cellular DNA barcoding has become a popular approach to study heterogeneity of cell populat...
This dataset represents the RNAP2 Atlas of potentially transcribed intergenic regions of the human g...
Abstract Measuring gene expression of tumor clones at single-cell resolution links functional conseq...
1. cellranger_output.zip : Zipped files for cellranger output 2. Code.zip: This contains the code f...
cellranger_output.zip : Zipped files for cellranger output Code.zip: This contains the code for Ste...
Organoids were pooled and each cell aggregate were minced using a sterile scalpel. The dissociated c...
Processed data for the paper "Whole genome doubling promotes tumorigenesis through loss of chromatin...
A) Unique TCRα and TCRβ sequences detected in the CD8+ T cells from the MC38 tumor and the spleen by...
Single cell RNA-sequencing dataset of peripheral blood mononuclear cells (pbmc: T, B, NK and monocyt...
Abstract Cellular DNA barcoding has become a popular approach to study heterogeneity of cell populat...
This directory contains sequencing data in fastq format for three scRNA-seq experiments found in Geh...
<p><b>(A)</b> Circos plot of normalized read counts (reads/100kb normalized to the total number of r...
Nowadays, single-cell DNA (sc-DNA) sequencing is showing up to be a valuable instrument to investiga...
This archive contains input data, singularity containers as well as all results related to the singl...
Single-cell transcriptome sequencing and cell lineage tracing technologies have enabled high- resolu...
Abstract Cellular DNA barcoding has become a popular approach to study heterogeneity of cell populat...
This dataset represents the RNAP2 Atlas of potentially transcribed intergenic regions of the human g...
Abstract Measuring gene expression of tumor clones at single-cell resolution links functional conseq...
1. cellranger_output.zip : Zipped files for cellranger output 2. Code.zip: This contains the code f...
cellranger_output.zip : Zipped files for cellranger output Code.zip: This contains the code for Ste...
Organoids were pooled and each cell aggregate were minced using a sterile scalpel. The dissociated c...
Processed data for the paper "Whole genome doubling promotes tumorigenesis through loss of chromatin...
A) Unique TCRα and TCRβ sequences detected in the CD8+ T cells from the MC38 tumor and the spleen by...
Single cell RNA-sequencing dataset of peripheral blood mononuclear cells (pbmc: T, B, NK and monocyt...
Abstract Cellular DNA barcoding has become a popular approach to study heterogeneity of cell populat...
This directory contains sequencing data in fastq format for three scRNA-seq experiments found in Geh...
<p><b>(A)</b> Circos plot of normalized read counts (reads/100kb normalized to the total number of r...
Nowadays, single-cell DNA (sc-DNA) sequencing is showing up to be a valuable instrument to investiga...
This archive contains input data, singularity containers as well as all results related to the singl...
Single-cell transcriptome sequencing and cell lineage tracing technologies have enabled high- resolu...
Abstract Cellular DNA barcoding has become a popular approach to study heterogeneity of cell populat...
This dataset represents the RNAP2 Atlas of potentially transcribed intergenic regions of the human g...